Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.57■□□□□ 0.24
PMS1P54277 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PMS1P54277 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 AL391825.1-201ENST00000457671 1364 ntBASIC16.56■□□□□ 0.24
PMS1P54277 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PMS1P54277 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 AC002472.2-201ENST00000442739 958 ntBASIC16.56■□□□□ 0.24
PMS1P54277 TPT1P11-201ENST00000458482 498 ntBASIC16.56■□□□□ 0.24
PMS1P54277 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.56■□□□□ 0.24
PMS1P54277 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.56■□□□□ 0.24
PMS1P54277 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 SPCS2P1-201ENST00000561636 679 ntBASIC16.56■□□□□ 0.24
PMS1P54277 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.56■□□□□ 0.24
PMS1P54277 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PMS1P54277 AC133539.2-201ENST00000604757 467 ntBASIC16.56■□□□□ 0.24
PMS1P54277 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 AC152010.1-201ENST00000415779 2006 ntBASIC16.56■□□□□ 0.24
PMS1P54277 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
PMS1P54277 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 AC006504.5-208ENST00000588784 2401 ntBASIC16.56■□□□□ 0.24
PMS1P54277 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PMS1P54277 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PMS1P54277 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PMS1P54277 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.55■□□□□ 0.24
PMS1P54277 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.55■□□□□ 0.24
PMS1P54277 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 AGGF1P1-201ENST00000509500 2073 ntBASIC16.55■□□□□ 0.24
PMS1P54277 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.55■□□□□ 0.24
PMS1P54277 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.55■□□□□ 0.24
PMS1P54277 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PMS1P54277 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.55■□□□□ 0.24
PMS1P54277 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 FAM207CP-201ENST00000443486 507 ntBASIC16.55■□□□□ 0.24
PMS1P54277 AC022447.6-201ENST00000515522 438 ntBASIC16.55■□□□□ 0.24
PMS1P54277 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.55■□□□□ 0.24
PMS1P54277 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.55■□□□□ 0.24
PMS1P54277 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 AL096865.1-201ENST00000606796 927 ntBASIC16.55■□□□□ 0.24
PMS1P54277 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.55■□□□□ 0.24
PMS1P54277 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PMS1P54277 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PMS1P54277 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms