Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 AC079178.1-201ENST00000420915 656 ntBASIC14.64□□□□□ -0.07
PDX1P52945 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.64□□□□□ -0.07
PDX1P52945 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.64□□□□□ -0.07
PDX1P52945 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDX1P52945 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.64□□□□□ -0.07
PDX1P52945 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.64□□□□□ -0.07
PDX1P52945 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 AC084364.1-201ENST00000551967 1556 ntBASIC14.64□□□□□ -0.07
PDX1P52945 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDX1P52945 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 ELK2AP-201ENST00000392510 1007 ntBASIC14.63□□□□□ -0.07
PDX1P52945 AL645937.2-201ENST00000396808 931 ntBASIC14.63□□□□□ -0.07
PDX1P52945 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 POM121L8P-201ENST00000417732 1281 ntBASIC14.63□□□□□ -0.07
PDX1P52945 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 POM121L9P-203ENST00000441984 1285 ntBASIC14.63□□□□□ -0.07
PDX1P52945 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
PDX1P52945 COX5BP1-201ENST00000507622 393 ntBASIC14.63□□□□□ -0.07
PDX1P52945 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 AC126915.1-201ENST00000522847 1038 ntBASIC14.63□□□□□ -0.07
PDX1P52945 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.63□□□□□ -0.07
PDX1P52945 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.63□□□□□ -0.07
PDX1P52945 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 AC073413.1-201ENST00000603927 732 ntBASIC14.63□□□□□ -0.07
PDX1P52945 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.63□□□□□ -0.07
PDX1P52945 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PDX1P52945 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PDX1P52945 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDX1P52945 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.63□□□□□ -0.07
PDX1P52945 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
PDX1P52945 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.62□□□□□ -0.07
PDX1P52945 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
PDX1P52945 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.62□□□□□ -0.07
PDX1P52945 FAM8A4P-201ENST00000435433 1213 ntBASIC14.62□□□□□ -0.07
PDX1P52945 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.62□□□□□ -0.07
PDX1P52945 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.62□□□□□ -0.07
PDX1P52945 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDX1P52945 CHMP4BP1-201ENST00000556017 588 ntBASIC14.62□□□□□ -0.07
PDX1P52945 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.62□□□□□ -0.07
PDX1P52945 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.62□□□□□ -0.07
PDX1P52945 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.62□□□□□ -0.07
PDX1P52945 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms