Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
GTF2A1P52655 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.84□□□□□ -0.03
GTF2A1P52655 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.84□□□□□ -0.03
GTF2A1P52655 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
GTF2A1P52655 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.84□□□□□ -0.03
GTF2A1P52655 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
GTF2A1P52655 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
GTF2A1P52655 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GTF2A1P52655 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GTF2A1P52655 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GTF2A1P52655 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
GTF2A1P52655 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC14.84□□□□□ -0.03
GTF2A1P52655 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.84□□□□□ -0.03
GTF2A1P52655 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
GTF2A1P52655 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GTF2A1P52655 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GTF2A1P52655 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
GTF2A1P52655 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GTF2A1P52655 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
GTF2A1P52655 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GTF2A1P52655 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
GTF2A1P52655 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.83□□□□□ -0.04
GTF2A1P52655 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GTF2A1P52655 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GTF2A1P52655 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.83□□□□□ -0.04
GTF2A1P52655 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.83□□□□□ -0.04
GTF2A1P52655 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.83□□□□□ -0.04
GTF2A1P52655 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 AC243591.1-201ENST00000452967 1364 ntBASIC14.83□□□□□ -0.04
GTF2A1P52655 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC14.83□□□□□ -0.04
GTF2A1P52655 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
GTF2A1P52655 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GTF2A1P52655 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 DLX4-206ENST00000611342 1662 ntBASIC14.82□□□□□ -0.04
GTF2A1P52655 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GTF2A1P52655 SPDYE21P-201ENST00000413323 827 ntBASIC14.82□□□□□ -0.04
GTF2A1P52655 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.82□□□□□ -0.04
GTF2A1P52655 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.82□□□□□ -0.04
GTF2A1P52655 AC022616.7-201ENST00000525383 220 ntBASIC14.82□□□□□ -0.04
GTF2A1P52655 LINC01238-205ENST00000567549 1107 ntBASIC14.82□□□□□ -0.04
GTF2A1P52655 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
GTF2A1P52655 NTF6B-201ENST00000591913 560 ntBASIC14.82□□□□□ -0.04
GTF2A1P52655 AP000867.4-201ENST00000641616 219 ntBASIC14.82□□□□□ -0.04
GTF2A1P52655 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.82□□□□□ -0.04
GTF2A1P52655 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms