Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RNF144AP50876 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF144AP50876 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.09□□□□□ -0.15
RNF144AP50876 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 AL158070.2-201ENST00000623713 1621 ntBASIC14.09□□□□□ -0.15
RNF144AP50876 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 INTS4P2-202ENST00000614726 2019 ntBASIC14.09□□□□□ -0.15
RNF144AP50876 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.09□□□□□ -0.15
RNF144AP50876 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.09□□□□□ -0.15
RNF144AP50876 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.09□□□□□ -0.15
RNF144AP50876 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.09□□□□□ -0.15
RNF144AP50876 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.09□□□□□ -0.15
RNF144AP50876 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 AC012508.2-201ENST00000567613 1472 ntBASIC14.09□□□□□ -0.15
RNF144AP50876 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.09□□□□□ -0.15
RNF144AP50876 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 AC007787.1-201ENST00000588095 1583 ntBASIC14.09□□□□□ -0.15
RNF144AP50876 AC005912.2-201ENST00000619492 2400 ntBASIC14.09□□□□□ -0.15
RNF144AP50876 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF144AP50876 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF144AP50876 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF144AP50876 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF144AP50876 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF144AP50876 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
RNF144AP50876 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.15
RNF144AP50876 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF144AP50876 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RNF144AP50876 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF144AP50876 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 AL138799.1-201ENST00000448213 1675 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.08□□□□□ -0.16
RNF144AP50876 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF144AP50876 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF144AP50876 DFFBP1-201ENST00000433250 979 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RNF144AP50876 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF144AP50876 ELK1P1-201ENST00000485699 580 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 HMGB3P14-201ENST00000494195 599 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 AC104596.2-201ENST00000512793 793 ntBASIC14.08□□□□□ -0.16
RNF144AP50876 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.08□□□□□ -0.16
RNF144AP50876 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms