Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.52■□□□□ 0.24
CPT1AP50416 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.52■□□□□ 0.24
CPT1AP50416 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.52■□□□□ 0.24
CPT1AP50416 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.52■□□□□ 0.24
CPT1AP50416 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.52■□□□□ 0.24
CPT1AP50416 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.52■□□□□ 0.24
CPT1AP50416 AL645933.1-201ENST00000440087 609 ntBASIC16.52■□□□□ 0.24
CPT1AP50416 NOC2LP1-201ENST00000450578 752 ntBASIC16.52■□□□□ 0.24
CPT1AP50416 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CPT1AP50416 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPT1AP50416 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.52■□□□□ 0.24
CPT1AP50416 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.52■□□□□ 0.24
CPT1AP50416 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.52■□□□□ 0.24
CPT1AP50416 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.52■□□□□ 0.24
CPT1AP50416 AL157813.1-201ENST00000612996 587 ntBASIC16.52■□□□□ 0.24
CPT1AP50416 AC133540.1-201ENST00000620845 1019 ntBASIC16.52■□□□□ 0.24
CPT1AP50416 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.52■□□□□ 0.24
CPT1AP50416 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CPT1AP50416 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPT1AP50416 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPT1AP50416 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.52■□□□□ 0.23
CPT1AP50416 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.52■□□□□ 0.23
CPT1AP50416 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPT1AP50416 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CPT1AP50416 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.52■□□□□ 0.23
CPT1AP50416 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.52■□□□□ 0.23
CPT1AP50416 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 AC112693.3-201ENST00000624819 1983 ntBASIC16.51■□□□□ 0.23
CPT1AP50416 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.51■□□□□ 0.23
CPT1AP50416 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.51■□□□□ 0.23
CPT1AP50416 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 DOC2GP-204ENST00000639052 2548 ntBASIC16.51■□□□□ 0.23
CPT1AP50416 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.51■□□□□ 0.23
CPT1AP50416 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.51■□□□□ 0.23
CPT1AP50416 FGFR3P1-201ENST00000449999 601 ntBASIC16.51■□□□□ 0.23
CPT1AP50416 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.51■□□□□ 0.23
CPT1AP50416 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.51■□□□□ 0.23
CPT1AP50416 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
CPT1AP50416 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.51■□□□□ 0.23
CPT1AP50416 AC018635.2-201ENST00000608625 364 ntBASIC16.51■□□□□ 0.23
CPT1AP50416 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.51■□□□□ 0.23
CPT1AP50416 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.51■□□□□ 0.23
CPT1AP50416 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CPT1AP50416 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.51■□□□□ 0.23
CPT1AP50416 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPT1AP50416 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CPT1AP50416 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 REXO1L2P-201ENST00000425429 2069 ntBASIC16.5■□□□□ 0.23
CPT1AP50416 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CPT1AP50416 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPT1AP50416 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPT1AP50416 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPT1AP50416 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 786.7 ms