Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
UBE2AP49459 AC084364.1-201ENST00000551967 1556 ntBASIC9.65□□□□□ -0.86
UBE2AP49459 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC9.65□□□□□ -0.86
UBE2AP49459 INTS4P1-203ENST00000641008 3683 ntBASIC9.65□□□□□ -0.86
UBE2AP49459 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC9.65□□□□□ -0.86
UBE2AP49459 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.65□□□□□ -0.86
UBE2AP49459 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
UBE2AP49459 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC9.65□□□□□ -0.86
UBE2AP49459 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE2AP49459 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 PARN-202ENST00000420015 2360 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC9.65□□□□□ -0.87
UBE2AP49459 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBE2AP49459 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
UBE2AP49459 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBE2AP49459 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
UBE2AP49459 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBE2AP49459 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
UBE2AP49459 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC9.65□□□□□ -0.87
UBE2AP49459 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBE2AP49459 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC9.65□□□□□ -0.87
UBE2AP49459 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
UBE2AP49459 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 KRT8P44-201ENST00000441609 1350 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE2AP49459 AL080243.2-201ENST00000418783 582 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 HLA-J-203ENST00000494367 1087 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE2AP49459 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE2AP49459 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE2AP49459 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 AC027612.4-201ENST00000605371 583 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 AC074044.1-201ENST00000609673 707 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE2AP49459 SPDYE12P-201ENST00000618416 771 ntBASIC9.64□□□□□ -0.87
UBE2AP49459 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE2AP49459 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE2AP49459 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE2AP49459 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE2AP49459 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms