Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 AC015656.1-201ENST00000624209 3578 ntBASIC14.68□□□□□ -0.06
KRT6CP48668 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KRT6CP48668 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6CP48668 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6CP48668 AL158070.2-201ENST00000623713 1621 ntBASIC14.68□□□□□ -0.06
KRT6CP48668 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 NUS1P3-201ENST00000423502 862 ntBASIC14.68□□□□□ -0.06
KRT6CP48668 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.68□□□□□ -0.06
KRT6CP48668 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.68□□□□□ -0.06
KRT6CP48668 DOC2GP-202ENST00000514950 1163 ntBASIC14.68□□□□□ -0.06
KRT6CP48668 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 AC093813.1-201ENST00000605066 256 ntBASIC14.68□□□□□ -0.06
KRT6CP48668 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.68□□□□□ -0.06
KRT6CP48668 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
KRT6CP48668 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6CP48668 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
KRT6CP48668 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6CP48668 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6CP48668 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
KRT6CP48668 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
KRT6CP48668 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
KRT6CP48668 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
KRT6CP48668 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6CP48668 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
KRT6CP48668 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6CP48668 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.67□□□□□ -0.06
KRT6CP48668 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.67□□□□□ -0.06
KRT6CP48668 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.67□□□□□ -0.06
KRT6CP48668 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.67□□□□□ -0.06
KRT6CP48668 RRP7BP-205ENST00000566851 833 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 AC106028.4-201ENST00000614509 607 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6CP48668 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6CP48668 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6CP48668 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
KRT6CP48668 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6CP48668 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6CP48668 AC087386.2-201ENST00000623212 4637 ntBASIC14.67□□□□□ -0.06
KRT6CP48668 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms