Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.27■□□□□ 0.04
GRIA1P42261 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 AC015802.1-201ENST00000588104 1449 ntBASIC15.27■□□□□ 0.04
GRIA1P42261 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.27■□□□□ 0.04
GRIA1P42261 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.27■□□□□ 0.04
GRIA1P42261 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.27■□□□□ 0.04
GRIA1P42261 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.27■□□□□ 0.04
GRIA1P42261 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 AC055811.4-201ENST00000624039 1754 ntBASIC15.27■□□□□ 0.04
GRIA1P42261 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.27■□□□□ 0.04
GRIA1P42261 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.27■□□□□ 0.04
GRIA1P42261 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
GRIA1P42261 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GRIA1P42261 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.27■□□□□ 0.04
GRIA1P42261 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.27■□□□□ 0.04
GRIA1P42261 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.27■□□□□ 0.04
GRIA1P42261 TMEM261P1-201ENST00000604899 340 ntBASIC15.27■□□□□ 0.04
GRIA1P42261 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIA1P42261 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
GRIA1P42261 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.27■□□□□ 0.03
GRIA1P42261 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GRIA1P42261 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIA1P42261 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 AC005840.4-201ENST00000541242 2494 ntBASIC15.26■□□□□ 0.03
GRIA1P42261 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GRIA1P42261 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIA1P42261 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GRIA1P42261 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIA1P42261 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GRIA1P42261 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIA1P42261 HSPA7-201ENST00000445535 1927 ntBASIC15.26■□□□□ 0.03
GRIA1P42261 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIA1P42261 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIA1P42261 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.26■□□□□ 0.03
GRIA1P42261 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GRIA1P42261 SOCS2P1-201ENST00000417727 557 ntBASIC15.26■□□□□ 0.03
GRIA1P42261 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIA1P42261 BCRP1-201ENST00000444246 691 ntBASIC15.26■□□□□ 0.03
GRIA1P42261 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.26■□□□□ 0.03
GRIA1P42261 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIA1P42261 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIA1P42261 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.26■□□□□ 0.03
GRIA1P42261 WASH4P-201ENST00000564273 1246 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms