Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.29■□□□□ 0.04
HADHAP40939 AL360270.3-201ENST00000609118 1348 ntBASIC15.29■□□□□ 0.04
HADHAP40939 AC063926.2-201ENST00000623766 1308 ntBASIC15.29■□□□□ 0.04
HADHAP40939 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HADHAP40939 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
HADHAP40939 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 AL162726.2-201ENST00000438986 1017 ntBASIC15.29■□□□□ 0.04
HADHAP40939 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.29■□□□□ 0.04
HADHAP40939 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 ELK1P1-201ENST00000485699 580 ntBASIC15.29■□□□□ 0.04
HADHAP40939 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.29■□□□□ 0.04
HADHAP40939 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.29■□□□□ 0.04
HADHAP40939 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.29■□□□□ 0.04
HADHAP40939 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.29■□□□□ 0.04
HADHAP40939 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.29■□□□□ 0.04
HADHAP40939 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.29■□□□□ 0.04
HADHAP40939 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
HADHAP40939 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
HADHAP40939 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HADHAP40939 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HADHAP40939 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HADHAP40939 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HADHAP40939 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.28■□□□□ 0.04
HADHAP40939 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HADHAP40939 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
HADHAP40939 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.28■□□□□ 0.04
HADHAP40939 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 CRB3P1-201ENST00000449338 276 ntBASIC15.28■□□□□ 0.04
HADHAP40939 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.28■□□□□ 0.04
HADHAP40939 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.28■□□□□ 0.04
HADHAP40939 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.28■□□□□ 0.04
HADHAP40939 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.28■□□□□ 0.04
HADHAP40939 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.28■□□□□ 0.04
HADHAP40939 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HADHAP40939 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HADHAP40939 AL359258.3-201ENST00000622910 2331 ntBASIC15.28■□□□□ 0.04
HADHAP40939 AC007686.3-201ENST00000619017 3487 ntBASIC15.28■□□□□ 0.04
HADHAP40939 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HADHAP40939 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HADHAP40939 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.27■□□□□ 0.04
HADHAP40939 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHAP40939 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HADHAP40939 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.27■□□□□ 0.04
HADHAP40939 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms