Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 AL139400.1-201ENST00000366220 510 ntBASIC13.21□□□□□ -0.29
GDNFP39905 EEF1DP4-201ENST00000446006 880 ntBASIC13.21□□□□□ -0.29
GDNFP39905 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.21□□□□□ -0.29
GDNFP39905 AC109322.1-201ENST00000524499 1264 ntBASIC13.21□□□□□ -0.29
GDNFP39905 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.21□□□□□ -0.29
GDNFP39905 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GDNFP39905 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.21□□□□□ -0.29
GDNFP39905 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
GDNFP39905 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.21□□□□□ -0.29
GDNFP39905 AC003101.2-201ENST00000612557 442 ntBASIC13.21□□□□□ -0.29
GDNFP39905 AC018529.1-201ENST00000613063 361 ntBASIC13.21□□□□□ -0.29
GDNFP39905 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.21□□□□□ -0.29
GDNFP39905 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.21□□□□□ -0.29
GDNFP39905 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.21□□□□□ -0.29
GDNFP39905 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
GDNFP39905 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GDNFP39905 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
GDNFP39905 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.21□□□□□ -0.3
GDNFP39905 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GDNFP39905 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GDNFP39905 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
GDNFP39905 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
GDNFP39905 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
GDNFP39905 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
GDNFP39905 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GDNFP39905 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GDNFP39905 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.2□□□□□ -0.3
GDNFP39905 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 CYP4F24P-201ENST00000586049 1580 ntBASIC13.2□□□□□ -0.3
GDNFP39905 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.2□□□□□ -0.3
GDNFP39905 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.2□□□□□ -0.3
GDNFP39905 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 AL356585.2-201ENST00000625078 2396 ntBASIC13.2□□□□□ -0.3
GDNFP39905 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 TPT1P11-201ENST00000458482 498 ntBASIC13.2□□□□□ -0.3
GDNFP39905 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.2□□□□□ -0.3
GDNFP39905 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.2□□□□□ -0.3
GDNFP39905 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.2□□□□□ -0.3
GDNFP39905 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.2□□□□□ -0.3
GDNFP39905 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
GDNFP39905 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
GDNFP39905 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.2□□□□□ -0.3
GDNFP39905 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GDNFP39905 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
GDNFP39905 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 AC005562.1-201ENST00000583030 3219 ntBASIC13.19□□□□□ -0.3
GDNFP39905 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms