Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 Z82170.1-201ENST00000625081 3192 ntBASIC12.49□□□□□ -0.41
SNCAP37840 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.49□□□□□ -0.41
SNCAP37840 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNCAP37840 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 AC015802.1-201ENST00000588104 1449 ntBASIC12.48□□□□□ -0.41
SNCAP37840 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SNCAP37840 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.48□□□□□ -0.41
SNCAP37840 ADH5P3-201ENST00000433842 1137 ntBASIC12.48□□□□□ -0.41
SNCAP37840 AC005237.2-201ENST00000434368 219 ntBASIC12.48□□□□□ -0.41
SNCAP37840 MKNK2P1-201ENST00000437526 628 ntBASIC12.48□□□□□ -0.41
SNCAP37840 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.48□□□□□ -0.41
SNCAP37840 FDX1P1-201ENST00000449115 551 ntBASIC12.48□□□□□ -0.41
SNCAP37840 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SNCAP37840 HNRNPUP1-201ENST00000554987 333 ntBASIC12.48□□□□□ -0.41
SNCAP37840 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 MTDHP5-201ENST00000598980 586 ntBASIC12.48□□□□□ -0.41
SNCAP37840 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.48□□□□□ -0.41
SNCAP37840 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 NUTM2HP-201ENST00000442076 2498 ntBASIC12.48□□□□□ -0.41
SNCAP37840 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.48□□□□□ -0.41
SNCAP37840 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNCAP37840 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
SNCAP37840 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 AL591122.2-201ENST00000624125 1853 ntBASIC12.47□□□□□ -0.41
SNCAP37840 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.47□□□□□ -0.41
SNCAP37840 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNCAP37840 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.47□□□□□ -0.41
SNCAP37840 AC136604.1-201ENST00000418535 575 ntBASIC12.47□□□□□ -0.41
SNCAP37840 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms