Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC004898.1-201ENST00000451057 766 ntBASIC14.79□□□□□ -0.04
TRIM23P36406 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 ZNF767P-206ENST00000513792 565 ntBASIC14.79□□□□□ -0.04
TRIM23P36406 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM23P36406 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.79□□□□□ -0.04
TRIM23P36406 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM23P36406 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 AL022328.3-201ENST00000607943 679 ntBASIC14.79□□□□□ -0.04
TRIM23P36406 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.79□□□□□ -0.04
TRIM23P36406 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.79□□□□□ -0.04
TRIM23P36406 MIR6787-201ENST00000616675 61 ntBASIC14.79□□□□□ -0.04
TRIM23P36406 AC002472.3-201ENST00000640124 621 ntBASIC14.79□□□□□ -0.04
TRIM23P36406 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM23P36406 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM23P36406 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM23P36406 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRIM23P36406 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.78□□□□□ -0.04
TRIM23P36406 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM23P36406 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM23P36406 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.78□□□□□ -0.04
TRIM23P36406 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM23P36406 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 AC008825.2-201ENST00000603374 718 ntBASIC14.78□□□□□ -0.04
TRIM23P36406 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.78□□□□□ -0.04
TRIM23P36406 BX088702.1-201ENST00000610784 235 ntBASIC14.78□□□□□ -0.04
TRIM23P36406 GPR182-203ENST00000622922 591 ntBASIC14.78□□□□□ -0.04
TRIM23P36406 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.78□□□□□ -0.04
TRIM23P36406 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRIM23P36406 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.78□□□□□ -0.04
TRIM23P36406 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.78□□□□□ -0.04
TRIM23P36406 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM23P36406 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM23P36406 AC091951.1-201ENST00000512854 2465 ntBASIC14.77□□□□□ -0.04
TRIM23P36406 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM23P36406 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM23P36406 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
TRIM23P36406 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM23P36406 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.77□□□□□ -0.04
TRIM23P36406 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms