Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCN1P35523 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCN1P35523 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCN1P35523 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCN1P35523 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCN1P35523 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 AP002761.4-201ENST00000565433 3361 ntBASIC17.22■□□□□ 0.35
CLCN1P35523 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN1P35523 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
CLCN1P35523 AC004461.1-201ENST00000412461 403 ntBASIC17.22■□□□□ 0.35
CLCN1P35523 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCN1P35523 FAM58DP-201ENST00000428076 619 ntBASIC17.22■□□□□ 0.35
CLCN1P35523 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLCN1P35523 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCN1P35523 MIR4313-201ENST00000580760 101 ntBASIC17.22■□□□□ 0.35
CLCN1P35523 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCN1P35523 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN1P35523 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCN1P35523 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CLCN1P35523 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCN1P35523 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 AL136982.4-201ENST00000437689 1740 ntBASIC17.21■□□□□ 0.35
CLCN1P35523 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCN1P35523 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN1P35523 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.21■□□□□ 0.35
CLCN1P35523 UPF3AP3-201ENST00000420996 769 ntBASIC17.21■□□□□ 0.35
CLCN1P35523 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CLCN1P35523 TPT1P11-201ENST00000458482 498 ntBASIC17.21■□□□□ 0.35
CLCN1P35523 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCN1P35523 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCN1P35523 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCN1P35523 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CLCN1P35523 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLCN1P35523 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLCN1P35523 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLCN1P35523 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 HLA-H-201ENST00000383620 1096 ntBASIC17.2■□□□□ 0.34
CLCN1P35523 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 BX842568.4-201ENST00000421222 227 ntBASIC17.2■□□□□ 0.34
CLCN1P35523 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCN1P35523 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCN1P35523 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLCN1P35523 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCN1P35523 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCN1P35523 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCN1P35523 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCN1P35523 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms