Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 AC079178.1-201ENST00000420915 656 ntBASIC15.4■□□□□ 0.06
SLC6A4P31645 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A4P31645 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC6A4P31645 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SLC6A4P31645 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC6A4P31645 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC6A4P31645 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC6A4P31645 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SLC6A4P31645 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 DBET-201ENST00000630918 3363 ntBASIC15.39■□□□□ 0.05
SLC6A4P31645 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.39■□□□□ 0.05
SLC6A4P31645 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC6A4P31645 TLE1P1-201ENST00000422965 589 ntBASIC15.39■□□□□ 0.05
SLC6A4P31645 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 PFN1P12-201ENST00000455938 534 ntBASIC15.39■□□□□ 0.05
SLC6A4P31645 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 AC244157.2-201ENST00000616239 1006 ntBASIC15.39■□□□□ 0.05
SLC6A4P31645 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.39■□□□□ 0.05
SLC6A4P31645 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC6A4P31645 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A4P31645 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A4P31645 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A4P31645 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC6A4P31645 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC6A4P31645 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A4P31645 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SLC6A4P31645 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A4P31645 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 LINC01101-201ENST00000622953 1884 ntBASIC15.38■□□□□ 0.05
SLC6A4P31645 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A4P31645 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A4P31645 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A4P31645 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms