Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 COX5BP8-201ENST00000416911 349 ntBASIC13.87□□□□□ -0.19
SHC1P29353 SOCS2P1-201ENST00000417727 557 ntBASIC13.87□□□□□ -0.19
SHC1P29353 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 INE1-201ENST00000456273 945 ntBASIC13.87□□□□□ -0.19
SHC1P29353 RN7SL837P-201ENST00000463010 287 ntBASIC13.87□□□□□ -0.19
SHC1P29353 RN7SL752P-201ENST00000463779 287 ntBASIC13.87□□□□□ -0.19
SHC1P29353 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHC1P29353 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.87□□□□□ -0.19
SHC1P29353 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.87□□□□□ -0.19
SHC1P29353 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.87□□□□□ -0.19
SHC1P29353 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.87□□□□□ -0.19
SHC1P29353 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.87□□□□□ -0.19
SHC1P29353 AC012645.4-201ENST00000610691 1061 ntBASIC13.87□□□□□ -0.19
SHC1P29353 CU634019.7-201ENST00000624153 1185 ntBASIC13.87□□□□□ -0.19
SHC1P29353 AC005252.2-201ENST00000624630 1141 ntBASIC13.87□□□□□ -0.19
SHC1P29353 FP236241.2-201ENST00000624906 1185 ntBASIC13.87□□□□□ -0.19
SHC1P29353 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.87□□□□□ -0.19
SHC1P29353 ST20-AS1-201ENST00000560255 4223 ntBASIC13.87□□□□□ -0.19
SHC1P29353 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHC1P29353 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.86□□□□□ -0.19
SHC1P29353 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SHC1P29353 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
SHC1P29353 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 AC098614.1-201ENST00000368528 745 ntBASIC13.86□□□□□ -0.19
SHC1P29353 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SHC1P29353 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
SHC1P29353 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.86□□□□□ -0.19
SHC1P29353 AP001582.1-201ENST00000525856 295 ntBASIC13.86□□□□□ -0.19
SHC1P29353 AC005225.4-201ENST00000557330 545 ntBASIC13.86□□□□□ -0.19
SHC1P29353 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 AC132938.2-201ENST00000579188 680 ntBASIC13.86□□□□□ -0.19
SHC1P29353 CLUHP6-201ENST00000580789 941 ntBASIC13.86□□□□□ -0.19
SHC1P29353 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 IGHV3-72-202ENST00000621503 303 ntBASIC13.86□□□□□ -0.19
SHC1P29353 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 AL591163.1-201ENST00000641757 987 ntBASIC13.86□□□□□ -0.19
SHC1P29353 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.86□□□□□ -0.19
SHC1P29353 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.86□□□□□ -0.19
SHC1P29353 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SHC1P29353 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHC1P29353 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.85□□□□□ -0.19
SHC1P29353 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms