Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 REXO1L2P-201ENST00000425429 2069 ntBASIC13.67□□□□□ -0.22
GDF1P27539 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 FKBP4P6-201ENST00000457486 1332 ntBASIC13.66□□□□□ -0.22
GDF1P27539 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GDF1P27539 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GDF1P27539 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.66□□□□□ -0.22
GDF1P27539 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 AC106820.3-201ENST00000561653 397 ntBASIC13.66□□□□□ -0.22
GDF1P27539 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.66□□□□□ -0.22
GDF1P27539 PPY2P-201ENST00000582808 702 ntBASIC13.66□□□□□ -0.22
GDF1P27539 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 EEF1DP1-201ENST00000585891 896 ntBASIC13.66□□□□□ -0.22
GDF1P27539 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.66□□□□□ -0.22
GDF1P27539 AC091271.1-201ENST00000611877 1162 ntBASIC13.66□□□□□ -0.22
GDF1P27539 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
GDF1P27539 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GDF1P27539 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 KRT8P4-201ENST00000509735 1454 ntBASIC13.66□□□□□ -0.22
GDF1P27539 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 AL109954.1-202ENST00000564051 2148 ntBASIC13.66□□□□□ -0.22
GDF1P27539 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GDF1P27539 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.66□□□□□ -0.22
GDF1P27539 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GDF1P27539 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.65□□□□□ -0.22
GDF1P27539 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 MIR326-201ENST00000362220 95 ntBASIC13.65□□□□□ -0.22
GDF1P27539 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 BTBD6P1-201ENST00000412176 1267 ntBASIC13.65□□□□□ -0.22
GDF1P27539 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 MTX1P1-201ENST00000440904 838 ntBASIC13.65□□□□□ -0.22
GDF1P27539 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.65□□□□□ -0.22
GDF1P27539 MESTP3-201ENST00000503460 968 ntBASIC13.65□□□□□ -0.22
GDF1P27539 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.65□□□□□ -0.22
GDF1P27539 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.65□□□□□ -0.22
GDF1P27539 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.65□□□□□ -0.22
GDF1P27539 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
GDF1P27539 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 MIR4538-201ENST00000581377 78 ntBASIC13.65□□□□□ -0.22
GDF1P27539 ZACNP1-201ENST00000612259 710 ntBASIC13.65□□□□□ -0.22
GDF1P27539 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.65□□□□□ -0.22
GDF1P27539 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GDF1P27539 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.65□□□□□ -0.22
GDF1P27539 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GDF1P27539 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms