Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.67□□□□□ -0.38
CXCL3P19876 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CXCL3P19876 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CXCL3P19876 AC092474.2-201ENST00000424288 719 ntBASIC12.67□□□□□ -0.38
CXCL3P19876 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 FGFR3P6-201ENST00000457012 610 ntBASIC12.67□□□□□ -0.38
CXCL3P19876 SCARNA2-201ENST00000458748 420 ntBASIC12.67□□□□□ -0.38
CXCL3P19876 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 AC008608.2-201ENST00000606089 416 ntBASIC12.67□□□□□ -0.38
CXCL3P19876 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CXCL3P19876 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.67□□□□□ -0.38
CXCL3P19876 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CXCL3P19876 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CXCL3P19876 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.67□□□□□ -0.38
CXCL3P19876 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CXCL3P19876 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 KHSRPP1-201ENST00000427983 1768 ntBASIC12.66□□□□□ -0.38
CXCL3P19876 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 AL031719.1-201ENST00000623365 2587 ntBASIC12.66□□□□□ -0.38
CXCL3P19876 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.66□□□□□ -0.38
CXCL3P19876 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 HCG4P8-203ENST00000443049 980 ntBASIC12.66□□□□□ -0.38
CXCL3P19876 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 IGHV3-65-201ENST00000523210 341 ntBASIC12.66□□□□□ -0.38
CXCL3P19876 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.66□□□□□ -0.38
CXCL3P19876 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.66□□□□□ -0.38
CXCL3P19876 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 AC090643.2-201ENST00000623442 2029 ntBASIC12.66□□□□□ -0.38
CXCL3P19876 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
CXCL3P19876 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CXCL3P19876 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms