Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 AC005229.1-201ENST00000392885 409 ntBASIC12.46□□□□□ -0.41
CCL3L1P16619 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL3L1P16619 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 FTH1P14-201ENST00000482930 551 ntBASIC12.46□□□□□ -0.41
CCL3L1P16619 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL3L1P16619 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL3L1P16619 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 AL022328.1-201ENST00000610050 478 ntBASIC12.46□□□□□ -0.41
CCL3L1P16619 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL3L1P16619 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CCL3L1P16619 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.46□□□□□ -0.42
CCL3L1P16619 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.46□□□□□ -0.42
CCL3L1P16619 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.46□□□□□ -0.42
CCL3L1P16619 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CCL3L1P16619 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL3L1P16619 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CCL3L1P16619 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL3L1P16619 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL3L1P16619 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CCL3L1P16619 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL3L1P16619 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CCL3L1P16619 CROCCP4-201ENST00000457096 498 ntBASIC12.45□□□□□ -0.42
CCL3L1P16619 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL3L1P16619 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.45□□□□□ -0.42
CCL3L1P16619 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL3L1P16619 GNRHR2-203ENST00000581100 1187 ntBASIC12.45□□□□□ -0.42
CCL3L1P16619 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL3L1P16619 AC004466.1-201ENST00000599515 1080 ntBASIC12.45□□□□□ -0.42
CCL3L1P16619 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL3L1P16619 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms