Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 AP000593.2-201ENST00000542775 1433 ntBASIC15.21■□□□□ 0.03
HLA-EP13747 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 RN7SKP175-201ENST00000408472 289 ntBASIC15.21■□□□□ 0.03
HLA-EP13747 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-EP13747 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 AC091804.1-201ENST00000486888 567 ntBASIC15.21■□□□□ 0.03
HLA-EP13747 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-EP13747 AC044849.1-201ENST00000519737 1188 ntBASIC15.21■□□□□ 0.03
HLA-EP13747 AC126915.1-201ENST00000522847 1038 ntBASIC15.21■□□□□ 0.03
HLA-EP13747 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-EP13747 RHOQP1-201ENST00000555758 579 ntBASIC15.21■□□□□ 0.03
HLA-EP13747 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-EP13747 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-EP13747 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-EP13747 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HLA-EP13747 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.21■□□□□ 0.02
HLA-EP13747 LILRP1-201ENST00000444199 1370 ntBASIC15.21■□□□□ 0.02
HLA-EP13747 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HLA-EP13747 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HLA-EP13747 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
HLA-EP13747 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-EP13747 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-EP13747 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.2■□□□□ 0.02
HLA-EP13747 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-EP13747 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-EP13747 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-EP13747 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-EP13747 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 NKAIN1P1-201ENST00000435754 582 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 IGHJ2P-201ENST00000454480 60 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 SCARNA20.5-201ENST00000516991 142 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-EP13747 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-EP13747 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-EP13747 AL358472.3-201ENST00000608147 415 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 AC002472.3-201ENST00000640124 621 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-EP13747 PPT1-215ENST00000641471 2368 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
HLA-EP13747 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-EP13747 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-EP13747 TMBIM7P-203ENST00000641617 1718 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 AC138028.6-201ENST00000616106 1482 ntBASIC15.2■□□□□ 0.02
HLA-EP13747 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-EP13747 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-EP13747 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-EP13747 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-EP13747 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-EP13747 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-EP13747 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-EP13747 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-EP13747 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms