Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
DEFA4P12838 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 BX640514.1-201ENST00000583223 1918 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 AC073957.3-201ENST00000609998 6758 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
DEFA4P12838 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.35□□□□□ -0.43
DEFA4P12838 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.35□□□□□ -0.43
DEFA4P12838 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 TARDBPP1-201ENST00000442013 1203 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 KLF2P3-201ENST00000451977 1087 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 AC067863.1-201ENST00000494933 530 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 SLED1-202ENST00000512051 380 ntBASIC12.35□□□□□ -0.43
DEFA4P12838 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.35□□□□□ -0.43
DEFA4P12838 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.35□□□□□ -0.43
DEFA4P12838 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
DEFA4P12838 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DEFA4P12838 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DEFA4P12838 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 AC107890.1-201ENST00000422478 521 ntBASIC12.34□□□□□ -0.43
DEFA4P12838 HIST3H2BA-201ENST00000436555 524 ntBASIC12.34□□□□□ -0.43
DEFA4P12838 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 HLA-V-204ENST00000476601 1289 ntBASIC12.34□□□□□ -0.43
DEFA4P12838 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 AC109322.1-201ENST00000524499 1264 ntBASIC12.34□□□□□ -0.43
DEFA4P12838 AC027369.6-201ENST00000525520 931 ntBASIC12.34□□□□□ -0.43
DEFA4P12838 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DEFA4P12838 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DEFA4P12838 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DEFA4P12838 AC073592.8-201ENST00000624126 511 ntBASIC12.34□□□□□ -0.43
DEFA4P12838 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.34□□□□□ -0.43
DEFA4P12838 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms