Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.94□□□□□ -0.18
BMP4P12644 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 SERBP1P3-201ENST00000459980 809 ntBASIC13.94□□□□□ -0.18
BMP4P12644 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 LINC02560-201ENST00000596379 459 ntBASIC13.94□□□□□ -0.18
BMP4P12644 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 AC004233.3-201ENST00000607794 1269 ntBASIC13.94□□□□□ -0.18
BMP4P12644 AL590560.3-201ENST00000623350 461 ntBASIC13.94□□□□□ -0.18
BMP4P12644 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.94□□□□□ -0.18
BMP4P12644 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.94□□□□□ -0.18
BMP4P12644 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.94□□□□□ -0.18
BMP4P12644 AC126335.2-201ENST00000623362 4637 ntBASIC13.94□□□□□ -0.18
BMP4P12644 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BMP4P12644 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BMP4P12644 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BMP4P12644 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 AC134407.2-201ENST00000625089 1978 ntBASIC13.93□□□□□ -0.18
BMP4P12644 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.93□□□□□ -0.18
BMP4P12644 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.93□□□□□ -0.18
BMP4P12644 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
BMP4P12644 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.93□□□□□ -0.18
BMP4P12644 AC245100.5-201ENST00000452108 331 ntBASIC13.93□□□□□ -0.18
BMP4P12644 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.93□□□□□ -0.18
BMP4P12644 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.93□□□□□ -0.18
BMP4P12644 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC13.93□□□□□ -0.18
BMP4P12644 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BMP4P12644 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 RN7SL204P-201ENST00000582831 262 ntBASIC13.93□□□□□ -0.18
BMP4P12644 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.93□□□□□ -0.18
BMP4P12644 RN7SL828P-201ENST00000607615 303 ntBASIC13.93□□□□□ -0.18
BMP4P12644 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.93□□□□□ -0.18
BMP4P12644 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.93□□□□□ -0.18
BMP4P12644 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.93□□□□□ -0.18
BMP4P12644 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BMP4P12644 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 AC022144.1-201ENST00000602255 1580 ntBASIC13.92□□□□□ -0.18
BMP4P12644 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
BMP4P12644 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.92□□□□□ -0.18
BMP4P12644 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BMP4P12644 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms