Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
UBL4AP11441 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 C1QBPP1-201ENST00000400117 770 ntBASIC14.04□□□□□ -0.16
UBL4AP11441 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.04□□□□□ -0.16
UBL4AP11441 TERF1P3-201ENST00000505638 1227 ntBASIC14.04□□□□□ -0.16
UBL4AP11441 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 AC092552.1-201ENST00000547243 906 ntBASIC14.04□□□□□ -0.16
UBL4AP11441 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.04□□□□□ -0.16
UBL4AP11441 OR2I1P-210ENST00000642037 4691 ntBASIC14.04□□□□□ -0.16
UBL4AP11441 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.04□□□□□ -0.16
UBL4AP11441 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
UBL4AP11441 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UBL4AP11441 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.04□□□□□ -0.16
UBL4AP11441 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBL4AP11441 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
UBL4AP11441 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 ACE3P-201ENST00000423435 1973 ntBASIC14.03□□□□□ -0.16
UBL4AP11441 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
UBL4AP11441 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 PIN1P1-201ENST00000412108 996 ntBASIC14.03□□□□□ -0.16
UBL4AP11441 SOCS2P1-201ENST00000417727 557 ntBASIC14.03□□□□□ -0.16
UBL4AP11441 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.03□□□□□ -0.16
UBL4AP11441 MYCLP2-201ENST00000449268 967 ntBASIC14.03□□□□□ -0.16
UBL4AP11441 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.03□□□□□ -0.16
UBL4AP11441 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.03□□□□□ -0.16
UBL4AP11441 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.03□□□□□ -0.16
UBL4AP11441 AC093525.8-201ENST00000624099 1342 ntBASIC14.03□□□□□ -0.16
UBL4AP11441 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBL4AP11441 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBL4AP11441 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBL4AP11441 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
UBL4AP11441 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms