Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC6P09630 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC6P09630 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC6P09630 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AL031713.1-201ENST00000564813 661 ntBASIC16.83■□□□□ 0.28
HOXC6P09630 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC6P09630 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC6P09630 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC6P09630 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HOXC6P09630 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC6P09630 AC074138.1-201ENST00000611182 1303 ntBASIC16.83■□□□□ 0.28
HOXC6P09630 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXC6P09630 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXC6P09630 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HOXC6P09630 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 AC105917.1-201ENST00000506637 2539 ntBASIC16.83■□□□□ 0.28
HOXC6P09630 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC6P09630 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HOXC6P09630 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 LILRP1-201ENST00000444199 1370 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC6P09630 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC6P09630 AC114501.1-201ENST00000445949 172 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXC6P09630 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXC6P09630 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC6P09630 MIR3677-201ENST00000578964 60 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 AL109837.1-201ENST00000603272 613 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 MIR6842-201ENST00000612539 65 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 MIR6769A-201ENST00000617340 73 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 AC242376.2-201ENST00000619355 883 ntBASIC16.82■□□□□ 0.28
HOXC6P09630 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HOXC6P09630 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC6P09630 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC6P09630 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXC6P09630 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 AL359258.3-201ENST00000622910 2331 ntBASIC16.81■□□□□ 0.28
HOXC6P09630 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HOXC6P09630 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC6P09630 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC6P09630 AC008723.1-201ENST00000506922 207 ntBASIC16.81■□□□□ 0.28
HOXC6P09630 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC6P09630 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 PHBP15-201ENST00000574228 665 ntBASIC16.81■□□□□ 0.28
HOXC6P09630 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC6P09630 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms