Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM2P07951 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM2P07951 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TPM2P07951 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 AC136604.1-201ENST00000418535 575 ntBASIC17.25■□□□□ 0.35
TPM2P07951 AC005237.2-201ENST00000434368 219 ntBASIC17.25■□□□□ 0.35
TPM2P07951 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 KRT18P58-201ENST00000527480 1120 ntBASIC17.25■□□□□ 0.35
TPM2P07951 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM2P07951 AC097359.3-201ENST00000603982 1210 ntBASIC17.25■□□□□ 0.35
TPM2P07951 AC084121.4-201ENST00000641598 221 ntBASIC17.25■□□□□ 0.35
TPM2P07951 AF228730.8-201ENST00000642140 221 ntBASIC17.25■□□□□ 0.35
TPM2P07951 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TPM2P07951 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TPM2P07951 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TPM2P07951 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM2P07951 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM2P07951 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM2P07951 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TPM2P07951 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 AL607033.1-201ENST00000623900 1599 ntBASIC17.24■□□□□ 0.35
TPM2P07951 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 AC004832.2-201ENST00000426397 482 ntBASIC17.24■□□□□ 0.35
TPM2P07951 HTR5BP-201ENST00000430851 1154 ntBASIC17.24■□□□□ 0.35
TPM2P07951 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM2P07951 AC069335.1-201ENST00000489972 472 ntBASIC17.24■□□□□ 0.35
TPM2P07951 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM2P07951 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.24■□□□□ 0.35
TPM2P07951 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM2P07951 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM2P07951 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM2P07951 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM2P07951 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM2P07951 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM2P07951 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM2P07951 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TPM2P07951 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM2P07951 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TPM2P07951 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms