Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.83□□□□□ -0.36
CD3DP04234 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.83□□□□□ -0.36
CD3DP04234 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.83□□□□□ -0.36
CD3DP04234 IGHV3-62-201ENST00000520057 340 ntBASIC12.83□□□□□ -0.36
CD3DP04234 RARRES2P9-201ENST00000565168 469 ntBASIC12.83□□□□□ -0.36
CD3DP04234 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.83□□□□□ -0.36
CD3DP04234 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.83□□□□□ -0.36
CD3DP04234 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.83□□□□□ -0.36
CD3DP04234 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.83□□□□□ -0.36
CD3DP04234 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.83□□□□□ -0.36
CD3DP04234 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.83□□□□□ -0.36
CD3DP04234 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD3DP04234 AC015818.8-201ENST00000587907 1519 ntBASIC12.83□□□□□ -0.36
CD3DP04234 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CD3DP04234 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CD3DP04234 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CD3DP04234 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.82□□□□□ -0.36
CD3DP04234 AC074338.1-201ENST00000416825 156 ntBASIC12.82□□□□□ -0.36
CD3DP04234 AC007967.2-201ENST00000432613 625 ntBASIC12.82□□□□□ -0.36
CD3DP04234 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.82□□□□□ -0.36
CD3DP04234 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 KRT8P23-201ENST00000560090 1207 ntBASIC12.82□□□□□ -0.36
CD3DP04234 AC106730.1-201ENST00000566722 1090 ntBASIC12.82□□□□□ -0.36
CD3DP04234 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.82□□□□□ -0.36
CD3DP04234 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.82□□□□□ -0.36
CD3DP04234 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 AL031595.1-201ENST00000623969 4709 ntBASIC12.82□□□□□ -0.36
CD3DP04234 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.82□□□□□ -0.36
CD3DP04234 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD3DP04234 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CD3DP04234 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms