Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 AL121949.3-201ENST00000406684 385 ntBASIC9.05□□□□□ -0.96
APOBP04114 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC9.05□□□□□ -0.96
APOBP04114 AC095040.1-201ENST00000513286 675 ntBASIC9.05□□□□□ -0.96
APOBP04114 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 AP000322.3-201ENST00000608665 388 ntBASIC9.05□□□□□ -0.96
APOBP04114 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 RN7SL23P-201ENST00000484055 275 ntBASIC9.05□□□□□ -0.96
APOBP04114 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 LY6E-215ENST00000523847 427 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC9.05□□□□□ -0.96
APOBP04114 INO80E-209ENST00000567254 625 ntTSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 AC245369.7-201ENST00000631386 350 ntBASIC9.05□□□□□ -0.96
APOBP04114 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 STRN-202ENST00000379213 2254 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
APOBP04114 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 AC025186.1-201ENST00000478174 870 ntBASIC9.04□□□□□ -0.96
APOBP04114 ALG1L7P-201ENST00000502317 768 ntBASIC9.04□□□□□ -0.96
APOBP04114 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 COX5A-205ENST00000568517 582 ntTSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC9.04□□□□□ -0.96
APOBP04114 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 FKBP4P8-201ENST00000610931 1369 ntBASIC9.04□□□□□ -0.96
APOBP04114 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC9.04□□□□□ -0.96
APOBP04114 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 KLF17P1-201ENST00000547105 1126 ntBASIC9.04□□□□□ -0.96
APOBP04114 AC020904.3-201ENST00000624199 442 ntBASIC9.04□□□□□ -0.96
APOBP04114 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 SSR4P1-203ENST00000599569 2260 ntBASIC9.04□□□□□ -0.96
APOBP04114 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 RN7SL582P-201ENST00000491078 279 ntBASIC9.04□□□□□ -0.96
APOBP04114 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC9.04□□□□□ -0.96
APOBP04114 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 AC026471.1-201ENST00000564629 3026 ntBASIC9.04□□□□□ -0.96
APOBP04114 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms