Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.08■□□□□ 0
NDUFS3O75489 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.08■□□□□ 0
NDUFS3O75489 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NDUFS3O75489 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NDUFS3O75489 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NDUFS3O75489 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.08■□□□□ 0
NDUFS3O75489 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDUFS3O75489 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDUFS3O75489 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.08■□□□□ 0
NDUFS3O75489 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.07■□□□□ 0
NDUFS3O75489 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NDUFS3O75489 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NDUFS3O75489 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 RNU1-114P-201ENST00000365297 166 ntBASIC15.07■□□□□ 0
NDUFS3O75489 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 AC022616.1-201ENST00000518688 554 ntBASIC15.07■□□□□ 0
NDUFS3O75489 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.07■□□□□ 0
NDUFS3O75489 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.07■□□□□ 0
NDUFS3O75489 CU634019.7-201ENST00000624153 1185 ntBASIC15.07■□□□□ 0
NDUFS3O75489 FP236241.2-201ENST00000624906 1185 ntBASIC15.07■□□□□ 0
NDUFS3O75489 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.07■□□□□ 0
NDUFS3O75489 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.07■□□□□ 0
NDUFS3O75489 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NDUFS3O75489 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 FAM45BP-202ENST00000592932 1624 ntBASIC15.06■□□□□ 0
NDUFS3O75489 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 AC015656.1-201ENST00000624209 3578 ntBASIC15.06■□□□□ 0
NDUFS3O75489 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.06■□□□□ 0
NDUFS3O75489 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
NDUFS3O75489 KLF2P2-201ENST00000416807 1039 ntBASIC15.06■□□□□ 0
NDUFS3O75489 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
NDUFS3O75489 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 TP53TG3HP-202ENST00000569755 579 ntBASIC15.06■□□□□ 0
NDUFS3O75489 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.06■□□□□ 0
NDUFS3O75489 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 WFDC1-204ENST00000613603 549 ntBASIC15.06■□□□□ 0
NDUFS3O75489 AP005019.2-201ENST00000615104 511 ntBASIC15.06■□□□□ 0
NDUFS3O75489 AC005252.2-201ENST00000624630 1141 ntBASIC15.06■□□□□ 0
NDUFS3O75489 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NDUFS3O75489 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.06■□□□□ 0
NDUFS3O75489 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NDUFS3O75489 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms