Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.56□□□□□ -0.08
CPNE3O75131 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 AL138709.1-201ENST00000614840 1693 ntBASIC14.56□□□□□ -0.08
CPNE3O75131 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 AL645937.2-201ENST00000396808 931 ntBASIC14.56□□□□□ -0.08
CPNE3O75131 MIR1908-201ENST00000410394 80 ntBASIC14.56□□□□□ -0.08
CPNE3O75131 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.56□□□□□ -0.08
CPNE3O75131 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.56□□□□□ -0.08
CPNE3O75131 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 DUX4L45-201ENST00000566406 1057 ntBASIC14.56□□□□□ -0.08
CPNE3O75131 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.56□□□□□ -0.08
CPNE3O75131 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 AC097376.2-205ENST00000610159 5334 ntBASIC14.56□□□□□ -0.08
CPNE3O75131 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CPNE3O75131 MYO15B-237ENST00000642007 4893 ntBASIC14.56□□□□□ -0.08
CPNE3O75131 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CPNE3O75131 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.56□□□□□ -0.08
CPNE3O75131 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPNE3O75131 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 AC006001.1-201ENST00000325130 474 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CPNE3O75131 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 AC078819.1-201ENST00000547454 765 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 AC012085.1-201ENST00000548270 765 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.55□□□□□ -0.08
CPNE3O75131 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.55□□□□□ -0.08
CPNE3O75131 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.55□□□□□ -0.08
CPNE3O75131 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 PTENP1-202ENST00000532280 3996 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.55□□□□□ -0.08
CPNE3O75131 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms