Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
ACTN4O43707 AL132655.2-201ENST00000596276 594 ntBASIC16.91■□□□□ 0.3
ACTN4O43707 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 AC015656.1-201ENST00000624209 3578 ntBASIC16.91■□□□□ 0.3
ACTN4O43707 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.91■□□□□ 0.3
ACTN4O43707 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.91■□□□□ 0.3
ACTN4O43707 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ACTN4O43707 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ACTN4O43707 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.9■□□□□ 0.3
ACTN4O43707 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 AC022616.1-201ENST00000518688 554 ntBASIC16.9■□□□□ 0.3
ACTN4O43707 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.9■□□□□ 0.3
ACTN4O43707 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.9■□□□□ 0.3
ACTN4O43707 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.9■□□□□ 0.3
ACTN4O43707 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 TMEM261P1-201ENST00000604899 340 ntBASIC16.9■□□□□ 0.3
ACTN4O43707 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.9■□□□□ 0.3
ACTN4O43707 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.9■□□□□ 0.3
ACTN4O43707 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ACTN4O43707 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ACTN4O43707 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ACTN4O43707 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ACTN4O43707 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ACTN4O43707 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ACTN4O43707 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.89■□□□□ 0.29
ACTN4O43707 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.89■□□□□ 0.29
ACTN4O43707 SOCS2P1-201ENST00000417727 557 ntBASIC16.89■□□□□ 0.29
ACTN4O43707 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.89■□□□□ 0.29
ACTN4O43707 AC114812.1-204ENST00000449669 728 ntBASIC16.89■□□□□ 0.29
ACTN4O43707 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.89■□□□□ 0.29
ACTN4O43707 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.89■□□□□ 0.29
ACTN4O43707 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ACTN4O43707 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.89■□□□□ 0.29
ACTN4O43707 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.89■□□□□ 0.29
ACTN4O43707 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
ACTN4O43707 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ACTN4O43707 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
ACTN4O43707 AC152010.1-201ENST00000415779 2006 ntBASIC16.89■□□□□ 0.29
ACTN4O43707 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ACTN4O43707 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ACTN4O43707 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ACTN4O43707 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ACTN4O43707 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms