Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 AP001267.2-201ENST00000532619 2086 ntBASIC15.05■□□□□ -0
LDB2O43679 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.05■□□□□ -0
LDB2O43679 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.05■□□□□ -0
LDB2O43679 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
LDB2O43679 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LDB2O43679 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LDB2O43679 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 AC097359.2-201ENST00000604992 2389 ntBASIC15.04■□□□□ -0
LDB2O43679 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.04■□□□□ -0
LDB2O43679 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
LDB2O43679 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.04■□□□□ -0
LDB2O43679 AC005229.1-201ENST00000392885 409 ntBASIC15.04■□□□□ -0
LDB2O43679 AL512384.1-201ENST00000406683 331 ntBASIC15.04■□□□□ -0
LDB2O43679 TMEM14DP-201ENST00000422205 345 ntBASIC15.04■□□□□ -0
LDB2O43679 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.04■□□□□ -0
LDB2O43679 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
LDB2O43679 SLC25A47P1-201ENST00000531577 414 ntBASIC15.04■□□□□ -0
LDB2O43679 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.04■□□□□ -0
LDB2O43679 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LDB2O43679 AC015936.2-201ENST00000593177 259 ntBASIC15.04■□□□□ -0
LDB2O43679 AC008735.3-201ENST00000596646 500 ntBASIC15.04■□□□□ -0
LDB2O43679 AC068418.2-201ENST00000577309 3703 ntBASIC15.04■□□□□ -0
LDB2O43679 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
LDB2O43679 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.04■□□□□ -0
LDB2O43679 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.04■□□□□ -0
LDB2O43679 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.04■□□□□ -0
LDB2O43679 AL354702.1-201ENST00000442006 1960 ntBASIC15.04■□□□□ -0
LDB2O43679 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.04■□□□□ -0
LDB2O43679 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.03■□□□□ -0
LDB2O43679 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 CLUHP2-201ENST00000426660 1303 ntBASIC15.03■□□□□ -0
LDB2O43679 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 AC092933.1-201ENST00000393644 945 ntBASIC15.03■□□□□ -0
LDB2O43679 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.03■□□□□ -0
LDB2O43679 TLE1P1-201ENST00000422965 589 ntBASIC15.03■□□□□ -0
LDB2O43679 AC007969.1-201ENST00000433675 447 ntBASIC15.03■□□□□ -0
LDB2O43679 AC245100.3-201ENST00000441281 285 ntBASIC15.03■□□□□ -0
LDB2O43679 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LDB2O43679 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 RN7SL48P-201ENST00000579283 293 ntBASIC15.03■□□□□ -0
LDB2O43679 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.03■□□□□ -0
LDB2O43679 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 ENPP7P14-201ENST00000621765 1040 ntBASIC15.03■□□□□ -0
LDB2O43679 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.03■□□□□ -0
LDB2O43679 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.03■□□□□ -0
LDB2O43679 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.03■□□□□ -0
LDB2O43679 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LDB2O43679 INTS4P1-203ENST00000641008 3683 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms