Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.38□□□□□ -0.59
SNAI2O43623 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.38□□□□□ -0.59
SNAI2O43623 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SNAI2O43623 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 AC097359.2-201ENST00000604992 2389 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 AC004870.1-201ENST00000315132 882 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SNAI2O43623 RN7SL589P-201ENST00000481268 310 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 FAM86C2P-203ENST00000528684 1004 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 AC145285.3-201ENST00000564603 959 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 AP000842.3-202ENST00000569238 1080 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SNAI2O43623 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.37□□□□□ -0.59
SNAI2O43623 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SNAI2O43623 HSPA7-201ENST00000445535 1927 ntBASIC11.37□□□□□ -0.59
SNAI2O43623 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
SNAI2O43623 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SNAI2O43623 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 AP000845.1-201ENST00000581677 2131 ntBASIC11.36□□□□□ -0.59
SNAI2O43623 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.36□□□□□ -0.59
SNAI2O43623 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SNAI2O43623 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SNAI2O43623 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SNAI2O43623 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SNAI2O43623 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SNAI2O43623 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.36□□□□□ -0.59
SNAI2O43623 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms