Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 AC138969.2-201ENST00000532739 9932 ntBASIC13.79□□□□□ -0.2
RNF13O43567 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ST20-AS1-201ENST00000560255 4223 ntBASIC13.79□□□□□ -0.2
RNF13O43567 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF13O43567 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF13O43567 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF13O43567 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF13O43567 RARRES2P5-201ENST00000564013 466 ntBASIC13.79□□□□□ -0.2
RNF13O43567 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.79□□□□□ -0.2
RNF13O43567 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.79□□□□□ -0.2
RNF13O43567 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.79□□□□□ -0.2
RNF13O43567 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.79□□□□□ -0.2
RNF13O43567 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF13O43567 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
RNF13O43567 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 AC136759.1-202ENST00000530858 2194 ntBASIC13.79□□□□□ -0.2
RNF13O43567 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF13O43567 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RNF13O43567 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF13O43567 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF13O43567 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 AC015656.1-201ENST00000624209 3578 ntBASIC13.78□□□□□ -0.2
RNF13O43567 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 SPDYE19P-201ENST00000338590 713 ntBASIC13.78□□□□□ -0.2
RNF13O43567 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 AC104457.1-201ENST00000401024 814 ntBASIC13.78□□□□□ -0.2
RNF13O43567 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.78□□□□□ -0.2
RNF13O43567 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 FAM86LP-201ENST00000478302 853 ntBASIC13.78□□□□□ -0.2
RNF13O43567 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 INGX-202ENST00000489074 768 ntBASIC13.78□□□□□ -0.2
RNF13O43567 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.78□□□□□ -0.2
RNF13O43567 RNA5SP421-201ENST00000516864 134 ntBASIC13.78□□□□□ -0.2
RNF13O43567 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.78□□□□□ -0.2
RNF13O43567 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.78□□□□□ -0.2
RNF13O43567 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF13O43567 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.78□□□□□ -0.2
RNF13O43567 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RNF13O43567 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF13O43567 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms