Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.33■□□□□ 0.04
RIPK2O43353 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 MIR6080-201ENST00000617359 66 ntBASIC15.33■□□□□ 0.04
RIPK2O43353 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RIPK2O43353 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RIPK2O43353 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.33■□□□□ 0.04
RIPK2O43353 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RIPK2O43353 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RIPK2O43353 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.33■□□□□ 0.04
RIPK2O43353 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
RIPK2O43353 TCAM1P-207ENST00000485295 1537 ntBASIC15.33■□□□□ 0.04
RIPK2O43353 AC015818.8-201ENST00000587907 1519 ntBASIC15.33■□□□□ 0.04
RIPK2O43353 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RIPK2O43353 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RIPK2O43353 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RIPK2O43353 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 AL512361.1-201ENST00000554200 418 ntBASIC15.32■□□□□ 0.04
RIPK2O43353 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 MTDHP5-201ENST00000598980 586 ntBASIC15.32■□□□□ 0.04
RIPK2O43353 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.32■□□□□ 0.04
RIPK2O43353 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RIPK2O43353 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 KRT8P14-201ENST00000414254 1442 ntBASIC15.32■□□□□ 0.04
RIPK2O43353 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 AC099521.3-201ENST00000624251 2938 ntBASIC15.32■□□□□ 0.04
RIPK2O43353 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RIPK2O43353 PTENP1-202ENST00000532280 3996 ntBASIC15.32■□□□□ 0.04
RIPK2O43353 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.32■□□□□ 0.04
RIPK2O43353 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RIPK2O43353 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.32■□□□□ 0.04
RIPK2O43353 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RIPK2O43353 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RIPK2O43353 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RIPK2O43353 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 GAPDHP40-201ENST00000505218 1006 ntBASIC15.31■□□□□ 0.04
RIPK2O43353 PGAM5P1-201ENST00000518923 814 ntBASIC15.31■□□□□ 0.04
RIPK2O43353 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.31■□□□□ 0.04
RIPK2O43353 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RIPK2O43353 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms