Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
NDUFA1O15239 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NDUFA1O15239 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
NDUFA1O15239 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NDUFA1O15239 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.38□□□□□ -0.75
NDUFA1O15239 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NDUFA1O15239 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NDUFA1O15239 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 KRT18P32-201ENST00000424695 1287 ntBASIC10.37□□□□□ -0.75
NDUFA1O15239 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 AC004832.2-201ENST00000426397 482 ntBASIC10.37□□□□□ -0.75
NDUFA1O15239 HTR5BP-201ENST00000430851 1154 ntBASIC10.37□□□□□ -0.75
NDUFA1O15239 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.37□□□□□ -0.75
NDUFA1O15239 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 KRT8P22-201ENST00000562317 1415 ntBASIC10.37□□□□□ -0.75
NDUFA1O15239 LINC01225-203ENST00000563550 1244 ntBASIC10.37□□□□□ -0.75
NDUFA1O15239 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.37□□□□□ -0.75
NDUFA1O15239 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.37□□□□□ -0.75
NDUFA1O15239 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.37□□□□□ -0.75
NDUFA1O15239 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
NDUFA1O15239 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NDUFA1O15239 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
NDUFA1O15239 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
NDUFA1O15239 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
NDUFA1O15239 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.36□□□□□ -0.75
NDUFA1O15239 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
NDUFA1O15239 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.36□□□□□ -0.75
NDUFA1O15239 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
NDUFA1O15239 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.36□□□□□ -0.75
NDUFA1O15239 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NDUFA1O15239 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NDUFA1O15239 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms