Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD2O14647 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD2O14647 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD2O14647 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD2O14647 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHD2O14647 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHD2O14647 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHD2O14647 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHD2O14647 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHD2O14647 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD2O14647 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CHD2O14647 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.21■□□□□ 0.83
CHD2O14647 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHD2O14647 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CHD2O14647 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHD2O14647 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD2O14647 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD2O14647 OR51A9P-201ENST00000422578 911 ntBASIC20.2■□□□□ 0.82
CHD2O14647 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CHD2O14647 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHD2O14647 SNORD3B-1-201ENST00000577988 758 ntBASIC20.2■□□□□ 0.82
CHD2O14647 AC090510.3-201ENST00000615831 821 ntBASIC20.2■□□□□ 0.82
CHD2O14647 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHD2O14647 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD2O14647 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD2O14647 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHD2O14647 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 AF274858.1-201ENST00000406288 372 ntBASIC20.2■□□□□ 0.82
CHD2O14647 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 PFN2-212ENST00000490975 858 ntTSL 4 BASIC20.2■□□□□ 0.82
CHD2O14647 RN7SL767P-201ENST00000493013 295 ntBASIC20.2■□□□□ 0.82
CHD2O14647 IGHEP2-201ENST00000519308 1256 ntBASIC20.2■□□□□ 0.82
CHD2O14647 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD2O14647 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD2O14647 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD2O14647 AC006504.5-208ENST00000588784 2401 ntBASIC20.2■□□□□ 0.82
CHD2O14647 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD2O14647 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CHD2O14647 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD2O14647 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD2O14647 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD2O14647 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD2O14647 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD2O14647 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD2O14647 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD2O14647 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD2O14647 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD2O14647 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 ALG1L7P-201ENST00000502317 768 ntBASIC20.18■□□□□ 0.82
CHD2O14647 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD2O14647 AC140658.4-201ENST00000561990 352 ntBASIC20.18■□□□□ 0.82
CHD2O14647 AC004686.1-201ENST00000605113 538 ntBASIC20.18■□□□□ 0.82
CHD2O14647 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 261.7 ms