Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.09■□□□□ 0.17
O00370 AC233724.13-201ENST00000598383 410 ntBASIC16.09■□□□□ 0.17
O00370 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.09■□□□□ 0.17
O00370 AL603764.1-201ENST00000636452 321 ntBASIC16.09■□□□□ 0.17
O00370 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.09■□□□□ 0.17
O00370 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.09■□□□□ 0.17
O00370 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
O00370 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
O00370 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
O00370 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
O00370 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.08■□□□□ 0.17
O00370 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
O00370 MTHFR-210ENST00000641407 2387 ntBASIC16.08■□□□□ 0.17
O00370 AC018529.2-202ENST00000611482 3087 ntBASIC16.08■□□□□ 0.17
O00370 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.08■□□□□ 0.17
O00370 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.08■□□□□ 0.17
O00370 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.08■□□□□ 0.17
O00370 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
O00370 AC055811.4-201ENST00000624039 1754 ntBASIC16.08■□□□□ 0.17
O00370 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
O00370 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
O00370 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
O00370 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
O00370 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.08■□□□□ 0.16
O00370 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
O00370 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.08■□□□□ 0.16
O00370 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
O00370 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.08■□□□□ 0.16
O00370 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.08■□□□□ 0.16
O00370 AC026434.2-201ENST00000506094 1078 ntBASIC16.08■□□□□ 0.16
O00370 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.08■□□□□ 0.16
O00370 GNRHR2-203ENST00000581100 1187 ntBASIC16.08■□□□□ 0.16
O00370 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
O00370 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.08■□□□□ 0.16
O00370 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.08■□□□□ 0.16
O00370 BTNL10-201ENST00000595971 695 ntBASIC16.08■□□□□ 0.16
O00370 AC145423.3-201ENST00000615987 467 ntBASIC16.08■□□□□ 0.16
O00370 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.08■□□□□ 0.16
O00370 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.08■□□□□ 0.16
O00370 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
O00370 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
O00370 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.08■□□□□ 0.16
O00370 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
O00370 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.08■□□□□ 0.16
O00370 AL138709.1-201ENST00000614840 1693 ntBASIC16.08■□□□□ 0.16
O00370 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
O00370 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.07■□□□□ 0.16
O00370 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
O00370 AC140479.7-201ENST00000636301 2332 ntBASIC16.07■□□□□ 0.16
O00370 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
O00370 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
O00370 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.07■□□□□ 0.16
O00370 AC092933.1-201ENST00000393644 945 ntBASIC16.07■□□□□ 0.16
O00370 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.07■□□□□ 0.16
O00370 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.07■□□□□ 0.16
O00370 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
O00370 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.07■□□□□ 0.16
O00370 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.07■□□□□ 0.16
O00370 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
O00370 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.07■□□□□ 0.16
O00370 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.07■□□□□ 0.16
O00370 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
O00370 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms