Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM3A6NNA2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 TUBB1P2-201ENST00000422712 1306 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 TUBB1P1-201ENST00000503144 1300 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 CR383656.2-201ENST00000548656 2254 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 AC142381.1-201ENST00000426099 345 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 MTND6P24-201ENST00000440466 518 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 MYCLP2-201ENST00000449268 967 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 MIR3615-201ENST00000581999 87 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 MYO15B-237ENST00000642007 4893 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 AL589702.1-201ENST00000641229 1509 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 AC105206.1-202ENST00000314927 2368 ntBASIC15.68■□□□□ 0.1
SRRM3A6NNA2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM3A6NNA2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 TPT1P11-201ENST00000458482 498 ntBASIC15.67■□□□□ 0.1
SRRM3A6NNA2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC055876.2-201ENST00000531834 546 ntBASIC15.67■□□□□ 0.1
SRRM3A6NNA2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC243562.2-201ENST00000561247 970 ntBASIC15.67■□□□□ 0.1
SRRM3A6NNA2 CTBP2P3-201ENST00000585629 1255 ntBASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC018442.1-201ENST00000421439 2061 ntBASIC15.67■□□□□ 0.1
SRRM3A6NNA2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM3A6NNA2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms