Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 AC099521.3-201ENST00000624251 2938 ntBASIC16.17■□□□□ 0.18
CTAGE9A4FU28 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTAGE9A4FU28 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 INE2-201ENST00000630399 1874 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 KRT8P48-201ENST00000515599 1220 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 KRT18P58-201ENST00000527480 1120 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 BANF1P1-201ENST00000553684 263 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AC084121.4-201ENST00000641598 221 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AF228730.8-201ENST00000642140 221 ntBASIC16.16■□□□□ 0.18
CTAGE9A4FU28 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.16■□□□□ 0.18
CTAGE9A4FU28 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 AC090505.1-201ENST00000430515 1834 ntBASIC16.15■□□□□ 0.18
CTAGE9A4FU28 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 COL6A4P2-202ENST00000504443 2753 ntBASIC16.15■□□□□ 0.18
CTAGE9A4FU28 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 AC092902.6-201ENST00000641783 218 ntBASIC16.15■□□□□ 0.18
CTAGE9A4FU28 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTAGE9A4FU28 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CTAGE9A4FU28 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.14■□□□□ 0.17
CTAGE9A4FU28 AL022342.1-201ENST00000400363 863 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms