Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAI2Q9Y5P3 PDIA3P1-201ENST00000471856 1510 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 AC099336.1-201ENST00000417053 1171 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 C2orf27AP3-201ENST00000434123 579 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 KLF2P4-201ENST00000451959 1225 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 MIR3615-201ENST00000581999 87 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 AL354718.3-201ENST00000616414 581 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 CR382287.1-201ENST00000623954 586 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 AL139099.5-201ENST00000635274 300 ntBASIC15.27■□□□□ 0.04
RAI2Q9Y5P3 AC068418.2-201ENST00000577309 3703 ntBASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAI2Q9Y5P3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 TUBB1P2-201ENST00000422712 1306 ntBASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 TUBB1P1-201ENST00000503144 1300 ntBASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 AC016694.1-201ENST00000434179 700 ntBASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 RN7SL48P-201ENST00000579283 293 ntBASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAI2Q9Y5P3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAI2Q9Y5P3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAI2Q9Y5P3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAI2Q9Y5P3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.25■□□□□ 0.03
RAI2Q9Y5P3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAI2Q9Y5P3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms