Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 AC015909.5-201ENST00000624336 2266 ntBASIC14.31□□□□□ -0.12
AP4S1Q9Y587 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 NUTM2HP-201ENST00000442076 2498 ntBASIC14.31□□□□□ -0.12
AP4S1Q9Y587 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.31□□□□□ -0.12
AP4S1Q9Y587 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 TARDBPP1-201ENST00000442013 1203 ntBASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP4S1Q9Y587 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms