Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 AL589739.1-201ENST00000607720 493 ntBASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 AL033527.5-202ENST00000641632 1098 ntBASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2D4Q9Y2X8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ELL2P1-201ENST00000413990 1906 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AC005252.3-201ENST00000623855 2258 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AL627223.1-201ENST00000416693 442 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AL080243.2-201ENST00000418783 582 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AC004832.2-201ENST00000426397 482 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ALG1L5P-201ENST00000482043 771 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AC004066.1-201ENST00000502488 802 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 LINC01115-203ENST00000606068 577 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CETN4P-206ENST00000642099 2168 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 AGGF1P1-201ENST00000509500 2073 ntBASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2D4Q9Y2X8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms