Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 SLC7A15P-201ENST00000424028 1363 ntBASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 KRT8P22-201ENST00000562317 1415 ntBASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AP001582.1-201ENST00000525856 295 ntBASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AC124283.3-201ENST00000570869 594 ntBASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AC099568.2-201ENST00000609194 695 ntBASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA7Q9UN72 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 C1QBPP1-201ENST00000400117 770 ntBASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 AC098850.1-201ENST00000419919 790 ntBASIC17.1■□□□□ 0.33
PCDHA7Q9UN72 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms