Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC008132.1-202ENST00000342005 1389 ntBASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SYNPO2Q9UMS6 AC018442.1-201ENST00000421439 2061 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 CYP4F23P-201ENST00000593402 1579 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 XBP1P1-201ENST00000436573 652 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL133466.1-201ENST00000447582 150 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 RN7SL11P-201ENST00000471305 293 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 RHOQP1-201ENST00000555758 579 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AL021578.1-201ENST00000613646 709 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AHCYP4-201ENST00000419201 1315 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 KHSRPP1-201ENST00000427983 1768 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 AC073347.1-201ENST00000421633 2643 ntBASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SYNPO2Q9UMS6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 TMBIM7P-202ENST00000641474 1516 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AC013726.1-201ENST00000563747 2285 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 Z97180.1-201ENST00000445173 988 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AL353637.1-201ENST00000451571 732 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 UPF3AP2-201ENST00000457924 1132 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AC092384.3-202ENST00000564646 2873 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 AC136759.1-202ENST00000530858 2194 ntBASIC17.11■□□□□ 0.33
SYNPO2Q9UMS6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYNPO2Q9UMS6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms