Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AL136317.3-201ENST00000618497 906 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 MBLAC2-202ENST00000514906 1936 ntBASIC14.29□□□□□ -0.12
VAPAQ9P0L0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.29□□□□□ -0.12
VAPAQ9P0L0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 MIR600HG-201ENST00000449175 5984 ntBASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 KRT8P14-201ENST00000414254 1442 ntBASIC14.28□□□□□ -0.12
VAPAQ9P0L0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 ST20-AS1-201ENST00000560255 4223 ntBASIC14.28□□□□□ -0.12
VAPAQ9P0L0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 AL359881.3-201ENST00000602640 1721 ntBASIC14.28□□□□□ -0.12
VAPAQ9P0L0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VAPAQ9P0L0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 DRD5P1-201ENST00000456605 1438 ntBASIC14.27□□□□□ -0.12
VAPAQ9P0L0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAPAQ9P0L0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 KLF2P3-201ENST00000451977 1087 ntBASIC14.27□□□□□ -0.13
VAPAQ9P0L0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAPAQ9P0L0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms