Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNMB3Q9NPA1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 AL023775.1-201ENST00000454907 1746 ntBASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 FAM21FP-201ENST00000426241 1131 ntBASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 HIST2H2BB-201ENST00000449108 381 ntBASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 MIR6752-201ENST00000618442 71 ntBASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 AC002472.3-201ENST00000640124 621 ntBASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNMB3Q9NPA1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 AC009542.2-202ENST00000619004 1067 ntBASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 AP001002.3-201ENST00000623482 206 ntBASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNMB3Q9NPA1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNMB3Q9NPA1 AL390755.1-201ENST00000623716 2027 ntBASIC16.8■□□□□ 0.28
KCNMB3Q9NPA1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms