Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC027612.1-201ENST00000445234 2395 ntBASIC15.97■□□□□ 0.15
CD248Q9HCU0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CD248Q9HCU0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 PHKG1P2-201ENST00000457537 863 ntBASIC15.96■□□□□ 0.15
CD248Q9HCU0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 AC133539.2-201ENST00000604757 467 ntBASIC15.96■□□□□ 0.15
CD248Q9HCU0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
CD248Q9HCU0 AC134407.2-201ENST00000625089 1978 ntBASIC15.96■□□□□ 0.15
CD248Q9HCU0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CD248Q9HCU0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CD248Q9HCU0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CD248Q9HCU0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 AC087481.3-201ENST00000602886 1894 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 SLED1-202ENST00000512051 380 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 AC133552.6-201ENST00000613406 534 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 CU634019.7-201ENST00000624153 1185 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 FP236241.2-201ENST00000624906 1185 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 BEND3P1-201ENST00000421591 1944 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD248Q9HCU0 SBF1P1-201ENST00000444527 5631 ntBASIC15.95■□□□□ 0.14
CD248Q9HCU0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD248Q9HCU0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms