Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 AL512638.1-201ENST00000457493 794 ntBASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 RN7SL399P-201ENST00000471648 279 ntBASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 AC023090.2-201ENST00000625182 2110 ntBASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 AC015802.1-201ENST00000588104 1449 ntBASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 ST20-AS1-201ENST00000560255 4223 ntBASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 LINC01230-201ENST00000625222 3017 ntBASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
LRTM1Q9HBL6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 RPL13AP25-201ENST00000484130 612 ntBASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 DOC2GP-202ENST00000514950 1163 ntBASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TPRX2P-201ENST00000535362 881 ntBASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 AL662799.1-202ENST00000614205 422 ntBASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRTM1Q9HBL6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms