Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.42□□□□□ -0.26
MMP28Q9H239 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 AKAP8P1-201ENST00000434743 1349 ntBASIC13.42□□□□□ -0.26
MMP28Q9H239 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
MMP28Q9H239 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
MMP28Q9H239 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MMP28Q9H239 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
MMP28Q9H239 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP28Q9H239 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.42□□□□□ -0.26
MMP28Q9H239 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP28Q9H239 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 AL355306.1-201ENST00000415580 579 ntBASIC13.42□□□□□ -0.26
MMP28Q9H239 MKNK2P1-201ENST00000437526 628 ntBASIC13.42□□□□□ -0.26
MMP28Q9H239 RN7SL589P-201ENST00000481268 310 ntBASIC13.42□□□□□ -0.26
MMP28Q9H239 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.42□□□□□ -0.26
MMP28Q9H239 YBX1P5-201ENST00000509441 847 ntBASIC13.42□□□□□ -0.26
MMP28Q9H239 FAM86C2P-203ENST00000528684 1004 ntBASIC13.42□□□□□ -0.26
MMP28Q9H239 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.42□□□□□ -0.26
MMP28Q9H239 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.42□□□□□ -0.26
MMP28Q9H239 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP28Q9H239 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP28Q9H239 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP28Q9H239 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.42□□□□□ -0.26
MMP28Q9H239 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.42□□□□□ -0.26
MMP28Q9H239 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MMP28Q9H239 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MMP28Q9H239 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.42□□□□□ -0.26
MMP28Q9H239 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
MMP28Q9H239 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP28Q9H239 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP28Q9H239 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 AL671277.1-201ENST00000429656 993 ntBASIC13.41□□□□□ -0.26
MMP28Q9H239 HTR5BP-201ENST00000430851 1154 ntBASIC13.41□□□□□ -0.26
MMP28Q9H239 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP28Q9H239 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.41□□□□□ -0.26
MMP28Q9H239 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 AC092902.6-201ENST00000641783 218 ntBASIC13.41□□□□□ -0.26
MMP28Q9H239 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
MMP28Q9H239 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.41□□□□□ -0.26
MMP28Q9H239 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.41□□□□□ -0.26
MMP28Q9H239 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
MMP28Q9H239 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MMP28Q9H239 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.41□□□□□ -0.26
MMP28Q9H239 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms