Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
NKX6-2Q9C056 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 AC138894.3-201ENST00000603787 634 ntBASIC12.27□□□□□ -0.45
NKX6-2Q9C056 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 AC116407.4-201ENST00000623319 1061 ntBASIC12.27□□□□□ -0.45
NKX6-2Q9C056 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NKX6-2Q9C056 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 POM121L4P-202ENST00000427789 1891 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 LAGE3P1-201ENST00000425356 484 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 RPS15P9-201ENST00000494093 319 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 MTDHP3-201ENST00000594186 672 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 AL645728.2-201ENST00000641974 660 ntBASIC12.26□□□□□ -0.45
NKX6-2Q9C056 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NKX6-2Q9C056 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms