Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.72□□□□□ -0.21
GABARAPL3Q9BY60 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AL627223.1-201ENST00000416693 442 ntBASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 MYADML-201ENST00000474610 2147 ntBASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 AC015909.5-201ENST00000624336 2266 ntBASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GABARAPL3Q9BY60 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
GABARAPL3Q9BY60 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
GABARAPL3Q9BY60 HTR5BP-201ENST00000430851 1154 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms